!Name=Schaner M., et al. (2003) Figure 1 !ExptSetNo=2253 !Description=Unsupervised hierarchical clustering of ovarian cell lines and ovarian cancers. Cell lines were not co-clustered with the tumor specimens, because these cell lines have a very prominent proliferation cluster (Perou et al., 1999; Ross et al., 2000) that significantly influences the clustering of the tumor samples if the two sample sets are not analyzed separately. Ovarian cancer specimens and cell lines were clustered based on variation of expression of 1,558 genes, as detailed in Methods. Genes were clustered based on similarity in their expression patterns among these cancers. Eight gene clusters are highlighted in this display. (A) Lymphocyte cluster, (B) Epithelial/Keratin expression (C) Ascites Signature, (D) Clear cell over-expressed genes, (E) Extracellular Matrix/Stromal cluster, (F) Proliferation cluster, (G) Heterogeneity across ovarian cases, and (H) Clear cell under-expressed genes. The color contrast of the scale bar indicates the fold of gene expression change in log2 space (numbers above the bar). !Name=Ovarian Ca OV292 !Exptid=7855 !Name=Ovarian Ca OV294 !Exptid=11735 !Name=Ovarian Ca OV299 !Exptid=7862 !Name=Ovarian Ca OV421 !Exptid=11437 !Name=Ovarian Ca OV422 !Exptid=7962 !Name=Ovarian Ca OV420 !Exptid=7423 !Name=Ovarian Ca OV425 !Exptid=7429 !Name=Ovarian Ca OV427 !Exptid=13901 !Name=Ovarian Ca OV5 !Exptid=13893 !Name=Ovarian Ca OV10 !Exptid=13898 !Name=Ovarian Ca OV775 !Exptid=13902 !Name=Ovarian Ca OV430 !Exptid=13904 !Name=Ovarian Ca OV11 !Exptid=23702 !Name=Ovarian Ca OV63 !Exptid=13907 !Name=Ovarian Ca OV43 !Exptid=13908 !Name=Ovarian Ca OVC8 !Exptid=14552 !Name=Ovarian Ca OVC5 !Exptid=14566 !Name=Ovarian Ca OV413 !Exptid=4057 !Name=Ovarian Ca OV407 !Exptid=11736 !Name=Ovarian Ca OV408 !Exptid=4060 !Name=Ovarian Ca OV409 !Exptid=3987 !Name=Ovarian Ca OV414 !Exptid=3993 !Name=Ovarian Ca OV415 !Exptid=3994 !Name=Ovarian Ca OV416 !Exptid=3995 !Name=Ovarian Ca OV293 !Exptid=4301 !Name=Ovarian Ca OV424 !Exptid=7422 !Name=Ovarian Ca OV297 !Exptid=4307 !Name=Ovarian Ca OV311 !Exptid=4312 !Name=Ovarian Ca OV308 !Exptid=4337 !Name=Ovarian Ca OV29 !Exptid=4341 !Name=Ovarian Ca OV269 !Exptid=4344 !Name=Ovarian Ca OV1477 !Exptid=4349 !Name=Ovarian Ca OV282 !Exptid=15416 !Name=Ovarian Ca OV2728 !Exptid=13900 !Name=Ovarian Ca OV314 !Exptid=4675 !Name=Ovarian Ca OV410 !Exptid=5517 !Name=Ovarian Ca OV25 !Exptid=4009 !Name=Ovarian Ca OV25C !Exptid=4010 !Name=Ovarian Ca OV98 !Exptid=4065 !Name=Ovarian Ca OV98B !Exptid=4068 !Name=Ovarian Ca OV411 !Exptid=4071 !Name=Ovarian Ca OV103 !Exptid=4073 !Name=Ovarian Ca OV312 !Exptid=5103 !Name=Ovarian Ca OV417 !Exptid=4075